added FV catalogue data

data-catalog.ttl

@@ -0,0 +1,170 @@
+@prefix owl:	 <http://www.w3.org/2002/07/owl#> .
+@prefix rdf:     <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
+@prefix rdfs:    <http://www.w3.org/2000/01/rdf-schema#> .
+@prefix xsd:     <http://www.w3.org/2001/XMLSchema#> .
+@prefix prov:    <http://www.w3.org/ns/prov#> .
+@prefix dc:      <http://purl.org/dc/elements/1.1/> .
+@prefix dct:     <http://purl.org/dc/terms/>.
+@prefix prov:    <http://www.w3.org/ns/prov#>.
+@prefix dcat:    <http://www.w3.org/ns/dcat#>.
+@prefix dqv:     <http://www.w3.org/ns/dcat#>.
+@prefix foaf:    <http://xmlns.com/foaf/0.1/>.
+@prefix fv:      <http://w3id.org/fv-metadata>.
+@prefix ejp:   <http://purl.org/ejp-rd/vocabulary/> .
+@prefix obo:   <http://purl.obolibrary.org/obo/> .
+@prefix ov:   <http://open.vocab.org/terms/> .
+@prefix ov:   <http://www.disit.org/km4city/schema#> .
+
+fv:fairvasc-catalog a dcat:Catalog ;
+  a prov:Entity;
+	dct:description "FAIRVASC Data Catalog presents the metadata for the catalogued datasets" ;
+	dct:title "FAIRVASC Data Catalog" ;
+  dct:created "2023-02-08"^^xsd:date ;
+  dct:modified "2023-02-08"^^xsd:date ;
+	dcat:Dataset <http://w3id.org/FAIRVASC#fairvasc-dataset>;
+  foaf:homepage <https://fairvasc.eu/>;
+  ejp:patientRegistry fv:FVregistry;
+  ejp:biobank fv:FVbiobank;
+  dcat:service fv:FVservice;
+	dct:publisher fv:FVpublisher.
+
+
+fv:fairvasc-dataset a dcat:Dataset ;
+    a prov:Entity;
+    dct:title "FAIRVASC dataset"@en ;
+    dct:description "FAIRVASC dataset including RKD, GeVas, GVEF, PolVas, Skane, Czech ANCA Associated Vasculitis Patient Data."@en ;
+    dct:created "2023-02-08"^^xsd:date ;
+    dct:modified "2023-02-08"^^xsd:date ;
+    dct:publisher fv:FVregistry ;
+    dcat:keyword "AAV, ANCA-associated vasculitis, Antineutrophil cytoplasmic antibody-associated vasculitis" ;
+    dct:license <https://creativecommons.org/licenses/by/4.0> ;
+    dcat:theme <http://identifiers.org/orphanet:156152> ;
+    dcat:theme <http://identifiers.org/orphanet:183> ;
+    dcat:theme <http://identifiers.org/orphanet:727> ;
+    dcat:theme <http://identifiers.org/orphanet:900> ;
+    prov:wasDerivedFrom <http://ontologies.adaptcentre.ie/dataset-hierarchy#data-capture> ;
+    dqv:hasQualityMetadata <https://w3id.org/lodquator/resource/232a-440a-b483-2fcbcf652d5b>; #temporary quality link
+    dcat:landingPage <https://fairvasc-fdp.adaptcentre.ie/> .
+
+fv:FVservice a dcat:DataService ;
+  dct:publisher fv:FVregistry ;
+  dct:title "FAIRVASC Query Interface" ;
+  dct:description "A federated query service for searching ANCA Vasculitis patient info" ;
+  dct:license <https://creativecommons.org/licenses/by/4.0> ;
+  dcat:accessURL <https://fairvasc.adaptcentre.ie/> ;
+  dct:accessRights [ a dct:RightsStatement ;
+  rdfs:label "FAIRVASC access rights"@en;
+  rdfs:description "Data Researchers can have access to the FAIRVASC interface by directly contacting to the FAIRVASC Consortium."@en ] ] .
+
+
+fv:FVpublisher  a foaf:Agent ;
+  dct:title "Publisher is a concortium of the 6 ANCA Vasculites registries including Ireland, Germany, Czech Republic, Poland, Italy, Skane registries" ;
+  foaf:page <https://fairvasc.eu> .
+
+fv:FVregistry a ejp:PatientRegistry ;
+  dct:publisher fv:FAIRVASC ;        
+  dct:title "FAIRVASC registry" ;
+  dct:description "6 ANCA Vasculites registries including RKD from Ireland, GeVas from Germany, Czech registry from Czech Republic, PolVas from Poland, Italy, Skane from Sweden registries";
+  dct:hasPart fv:RKDRegistry, fv:GeVasRegistry, fv:SkaneRegistry, fv:PolVasRegistry, fv:CzechRegistry, fv:GFEVRegistry, fv:ItalianRegistry;
+  ejp:populationCoverage  :population_coverage ;
+  dcat:theme  <http://identifiers.org/orphanet:156152> .
+
+fv:RKDRegistry a ejp:PatientRegistry ;
+  dct:publisher fv:RKDOrganisation ;        
+  dct:title "Rare Kidney Disease registry" ;
+  ov:prefAcronym "RKD" ;
+  obo:RO_0002350 "ERN RITA";
+  dct:description "RKD registry is from Ireland which collects ANCA Vasculitis data from patients. Created in 2012, the VINE registry covers the whole of Ireland and recruits
+patients with systemic vasculitis. The longitudinal clinical data are linked to multiple biological sample types obtained at various stages of the disease";
+  foaf:homepage <https://www.tcd.ie/medicine/thkc/research/rare.php> ;
+  schema:sponsor fv:TCD ;
+  km4c:Recruitment fv:recID ;
+  ejp:populationCoverage  fv:RKD_population_coverage ;
+  dcat:theme  <http://identifiers.org/orphanet:156152> .
+
+
+fv:RKDOrganisation a foaf:Organisation ;
+  dct:title "St. James Hospital,... " ;
+  foaf:Person "Mr MBBCh PhD Mark Little"  ;
+  foaf:mbox <mlittle@tcd.ie>;
+  foaf:phone "+35318964810" ;
+  dct:spatial  fv:RKDLocation .
+
+fv:TCD a foaf:Organisation ;
+  dct:title "Trinity College Dublin" ;
+  vivo:AcademicDepartment "Trinity Health Kidney Centre";
+  vivo:hasFacility "Trinity Translational Medicine Institute";
+  vcard:postalCode "D08 W9RT Dublin";
+  dct:spatial  fv:RKDLocation .
+
+fv:RKDLocation a dct:Location ;
+  dct:title  "Ireland" .
+
+fv:GeVasRegistry a ejp:PatientRegistry ;
+  dct:publisher fv:GeVasOrganisation ;        
+  dct:title "GeVas registry" ;
+  dct:description "GeVas registry is from Germany which collects ANCA Vasculitis data from patients.";
+  ejp:populationCoverage  fv:GeVas_population_coverage ;
+  dcat:theme  <http://identifiers.org/orphanet:156152> .
+
+fv:SkaneRegistry a ejp:PatientRegistry ;
+  dct:publisher fv:SkaneOrganisation ;        
+  dct:title "Skane registry" ;
+  dct:description "Skane registry is from Sweden which collects ANCA Vasculitis data from patients.";
+  ejp:populationCoverage  fv:Skane_population_coverage ;
+  dcat:theme  <http://identifiers.org/orphanet:156152> .
+
+fv:GFEVRegistry a ejp:PatientRegistry ;
+  dct:publisher fv:GFEVOrganisation ;        
+  dct:title "GFEV registry" ;
+  dct:description "GFEV registry is from France which collects ANCA Vasculitis data from patients.";
+  ejp:populationCoverage  :GFEV_population_coverage ;
+  dcat:theme  <http://identifiers.org/orphanet:156152> .
+
+
+fv:ItalianRegistry a ejp:PatientRegistry ;
+  dct:publisher fv:ItalianOrganisation ;        
+  dct:title "Italian registry" ;
+  dct:description "Italian registry is from Italy which collects ANCA Vasculitis data from patients.";
+  ejp:populationCoverage  :Italy_population_coverage ;
+  dcat:theme  <http://identifiers.org/orphanet:156152> .
+
+
+fv:PolVasRegistry a ejp:PatientRegistry ;
+  dct:publisher fv:PolVasOrganisation ;        
+  dct:title "PolVas registry" ;
+  dct:description "PolVas registry is from Poland which collects ANCA Vasculitis data from patients.";
+  ejp:populationCoverage  :PolVas_population_coverage ;
+  dcat:theme  <http://identifiers.org/orphanet:156152> .
+
+fv:CzechRegistry a ejp:PatientRegistry ;
+  dct:publisher fv:CzechOrganisation ;        
+  dct:title "Czech registry" ;
+  dct:description "Czech registry is from Czech Republic which collects ANCA Vasculitis data from patients.";
+  ejp:populationCoverage  :Czech_population_coverage ;
+  dcat:theme  <http://identifiers.org/orphanet:156152> .  
+
+
+fv:FV_population_coverage  a sio:SIO_001166 ;
+  rdfs:label  "International" .
+
+fv:RKD_population_coverage  a sio:SIO_001166 ;
+  rdfs:label  "National" .
+
+fv:location a dct:Location ;
+  dct:title  "Ireland, Germany, Czech Republic, Poland, Italy, Sweden, France" .
+
+
+
+fv:FVbiobank a ejp:Biobank ;
+  dct:publisher fv:TCD ;        
+  dct:title "Rare Kidney Disease Biobank" ;
+  dct:description "Donor registry from RD-CONNECT (with identifier 178115) MERIL (with identifier 15476)";
+  ejp:populationCoverage  fv:RKD_population_coverage ;
+  dcat:theme  <http://identifiers.org/orphanet:156152> ;
+  foaf:page <https://www.tcd.ie/medicine/thkc/research/rare.php> .
+
+
+
+fv:location a dct:Location ;
+  dct:title  "Ireland" .